Experiments

The "Experiment" model in Pluto is a container for storing raw data and running analyses

• Rerunning a pipeline on an experiment
• Biological entity annotations in experiments
• Selecting strandedness for RNA-seq
• Using Storyboards
• Formatting sample annotations for experiments with multiple antibodies
• Importing experiment assay data: FASTQ files
• Importing experiment assay data: GEO
• Downloading BAM files
• Viewing pipeline methods
• Experiment change history
• Experiment attachments
• Importing & editing experiment sample data
• Importing experiment assay data: cloud locations
• Bulk RNA sequencing
• Clone an experiment
• What kinds of experiment can I analyze with Pluto?
• Experiment provenance
• Editing an experiment's FASTQ files
• Archiving experiments