Reference: Analysis Terms & Methods

Details and useful links to statistical methods and tools used throughout Pluto

• What is EdgeR?
• What is FPKM?
• What is paired-end sequencing?
• Where does variance come from in RNA-seq data?
• What is TPM?
• What is RPKM?
• What is DESeq2?
• What is RSEM? | Pluto Help Center
• What are adapters?
• What is Glimma?
• What is a FASTQ file?
• SD versus SEM
• What is fold change?
• What is Trim Galore?
• What is SAMtools?
• Introduction to RNA-seq
• What is a reference genome?
• Statistical tests for comparing groups of samples
• What is multiplexing?
• What is FASTQC?
• What is Kallisto?
• What is voom?
• What is RSeQC?
• What is SortMeRNA?
• What is the read-count?
• What is STAR?
• What QC information does Pluto provide for RNA-seq analysis?
• What is depth of sequencing? | Pluto Help Center