Getting Started: Pluto

Handy guides to help you make the most of Pluto

10 articles in this collection
Written by Rani Powers, PhD, MacKenzie Demmel, and Andrew Goodspeed

Managing your account

Invited to collaborate on Pluto? Here's how to create & manage your account.

Written by MacKenzie Demmel
Updated over a week ago

Configure SAML Single Sign-On for Pluto

Enterprise plans using SSO need to complete a few configuration steps

Written by Rani Powers, PhD
Updated over a week ago

Experiment attachments

Store protocols, documents, images, and other information relevant to the experiment on the Attachments tab

Written by MacKenzie Demmel
Updated over a week ago

Experiments: Bulk RNA-seq

Transform FASTQ files into interactive results pages with a few clicks

Written by Rani Powers, PhD
Updated over a week ago

Survival analysis in Pluto

Overview of data formatting and methods for survival analysis

Written by Andrew Goodspeed
Updated over a week ago

Analysis: Differential expression

Compare genome-wide gene expression profiles across two groups

Written by Rani Powers, PhD
Updated over a week ago

Analysis: Gene set enrichment

Calculate enrichment scores for gene sets from the MSigDB

Written by Andrew Goodspeed
Updated over a week ago

Add comparisons for gene set enrichment analysis

Run differential expression to create a comparison for GSEA

Written by Rani Powers, PhD
Updated over a week ago

Can Pluto submit my data to GEO?

Yes! Pluto takes care of public database submissions for you

Written by Rani Powers, PhD
Updated over a week ago

Importing raw data: FASTQ files

Pluto supports FASTQ file upload via drag and drop and other methods

Written by Andrew Goodspeed
Updated over a week ago